Target Information
Target General Information | Top | |||||
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Target ID |
T59102
(Former ID: TTDR01217)
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Target Name |
Platelet-derived growth factor receptor beta (PDGFRB)
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Synonyms |
Platelet-derived growth factor receptor 1; PDGFR1; PDGFR-beta; PDGFR-1; PDGFR; PDGF-R-beta; CD140b antigen; CD140b; CD140 antigen-like family member B; Beta-type platelet-derived growth factor receptor; Beta-PDGFR; Beta platelet-derived growth factor receptor
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Gene Name |
PDGFRB
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Target Type |
Successful target
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[1] | ||||
Disease | [+] 3 Target-related Diseases | + | ||||
1 | Acute diabete complication [ICD-11: 5A2Y] | |||||
2 | Renal cell carcinoma [ICD-11: 2C90] | |||||
3 | Thrombocytopenia [ICD-11: 3B64] | |||||
Function |
Plays an essential role in blood vessel development by promoting proliferation, migration and recruitment of pericytes and smooth muscle cells to endothelial cells. Plays a role in the migration of vascular smooth muscle cells and the formation of neointima at vascular injury sites. Required for normal development of the cardiovascular system. Required for normal recruitment of pericytes (mesangial cells) in the kidney glomerulus, and for normal formation of a branched network of capillaries in kidney glomeruli. Promotes rearrangement of the actin cytoskeleton and the formation of membrane ruffles. Binding of its cognate ligands - homodimeric PDGFB, heterodimers formed by PDGFA and PDGFB or homodimeric PDGFD -leads to the activation of several signaling cascades; the response depends on the nature of the bound ligand and is modulated by the formation of heterodimers between PDGFRA and PDGFRB. Phosphorylates PLCG1, PIK3R1, PTPN11, RASA1/GAP, CBL, SHC1 and NCK1. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate, mobilization of cytosolic Ca(2+) and the activation of protein kinase C. Phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, leads to the activation of the AKT1 signaling pathway. Phosphorylation of SHC1, or of the C-terminus of PTPN11, creates a binding site for GRB2, resulting in the activation of HRAS, RAF1 and down-stream MAP kinases, including MAPK1/ERK2 and/or MAPK3/ERK1. Promotes phosphorylation and activation of SRC family kinases. Promotes phosphorylation of PDCD6IP/ALIX and STAM. Receptor signaling is down-regulated by protein phosphatases that dephosphorylate the receptor and its down-stream effectors, and by rapid internalization of the activated receptor. Tyrosine-protein kinase that acts as cell-surface receptor for homodimeric PDGFB and PDGFD and for heterodimers formed by PDGFA and PDGFB, and plays an essential role in the regulation of embryonic development, cell proliferation, survival, differentiation, chemotaxis and migration.
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BioChemical Class |
Kinase
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UniProt ID | ||||||
EC Number |
EC 2.7.10.1
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Sequence |
MRLPGAMPALALKGELLLLSLLLLLEPQISQGLVVTPPGPELVLNVSSTFVLTCSGSAPV
VWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFV PDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQRGFS GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGN EVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH QDEKAINITVVESGYVRLLGEVGTLQFAELHRSRTLQVVFEAYPPPTVLWFKDNRTLGDS SAGEIALSTRNVSETRYVSELTLVRVKVAEAGHYTMRAFHEDAEVQLSFQLQINVPVRVL ELSESHPDSGEQTVRCRGRGMPQPNIIWSACRDLKRCPRELPPTLLGNSSEEESQLETNV TYWEEEQEFEVVSTLRLQHVDRPLSVRCTLRNAVGQDTQEVIVVPHSLPFKVVVISAILA LVVLTIISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQL VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQHHSDKRRPPSAELYSNAL PVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVP SAPERTCRATLINESPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG GTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLER LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGFHGLRSPLDTSSVLYTAVQPNEGDND YIIPLPDPKPEVADEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQDEPEPEPQLELQV EPEPELEQLPDSGCPAPRAEAEDSFL Click to Show/Hide
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3D Structure | Click to Show 3D Structure of This Target | AlphaFold | ||||
HIT2.0 ID | T34VFO |
Drugs and Modes of Action | Top | |||||
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Approved Drug(s) | [+] 3 Approved Drugs | + | ||||
1 | Becaplermin | Drug Info | Approved | Diabetic complication | [2] | |
2 | Romiplostim | Drug Info | Approved | Thrombocytopenia | [3], [4] | |
3 | Sorafenib | Drug Info | Approved | Renal cell carcinoma | [5], [6] | |
Clinical Trial Drug(s) | [+] 6 Clinical Trial Drugs | + | ||||
1 | E-3810 | Drug Info | Phase 3 | Solid tumour/cancer | [7], [8] | |
2 | Famitinib | Drug Info | Phase 2 | Solid tumour/cancer | [9], [10] | |
3 | XL-820 | Drug Info | Phase 2 | Solid tumour/cancer | [11] | |
4 | MK-2461 | Drug Info | Phase 1/2 | Alzheimer disease | [12] | |
5 | SNN-0031 | Drug Info | Phase 1/2 | Brain injury | [13] | |
6 | TAK-593 | Drug Info | Phase 1 | Solid tumour/cancer | [14] | |
Discontinued Drug(s) | [+] 3 Discontinued Drugs | + | ||||
1 | CDP-860 | Drug Info | Discontinued in Phase 2 | Solid tumour/cancer | [15] | |
2 | SRI-62-834 | Drug Info | Discontinued in Phase 2 | Solid tumour/cancer | [16] | |
3 | CEP-2563 | Drug Info | Discontinued in Phase 1 | Solid tumour/cancer | [17] | |
Mode of Action | [+] 2 Modes of Action | + | ||||
Modulator | [+] 5 Modulator drugs | + | ||||
1 | Becaplermin | Drug Info | [18] | |||
2 | Sorafenib | Drug Info | [6], [19] | |||
3 | SNN-0031 | Drug Info | [22] | |||
4 | TAK-593 | Drug Info | [14], [23] | |||
5 | CDP-860 | Drug Info | [27] | |||
Inhibitor | [+] 118 Inhibitor drugs | + | ||||
1 | Romiplostim | Drug Info | [1] | |||
2 | E-3810 | Drug Info | [20] | |||
3 | Famitinib | Drug Info | [10] | |||
4 | XL-820 | Drug Info | [21] | |||
5 | MK-2461 | Drug Info | [12] | |||
6 | PMID25656651-Compound-21a | Drug Info | [24] | |||
7 | PMID25656651-Compound-21b | Drug Info | [24] | |||
8 | PMID28460551-Compound-2 | Drug Info | [25] | |||
9 | Pyridine derivative 18 | Drug Info | [26] | |||
10 | SRI-62-834 | Drug Info | [28] | |||
11 | CEP-2563 | Drug Info | [28] | |||
12 | AG1295 | Drug Info | [29] | |||
13 | RG-13022 | Drug Info | [30] | |||
14 | (1H-indol-2-yl)(5-methoxy-1H-indol-2-yl)methanone | Drug Info | [31] | |||
15 | (1H-indol-2-yl)(5-phenoxy-1H-indol-2-yl)methanone | Drug Info | [31] | |||
16 | (1H-indol-2-yl)(6-methoxy-1H-indol-2-yl)methanone | Drug Info | [31] | |||
17 | (2,4-dihydroindeno[1,2-c]pyrazol-3-yl)phenylamine | Drug Info | [32] | |||
18 | (5-fluoro-1H-indol-2-yl)-(1H-indol-2-yl)methanone | Drug Info | [31] | |||
19 | (5-hydroxy-1H-indol-2-yl)(1H-indol-2-yl)methanone | Drug Info | [31] | |||
20 | (benzo[b]furan-2-yl)-(1H-indol-2-yl)methanone | Drug Info | [29] | |||
21 | 1-Phenyl-1H-benzoimidazol-5-ol | Drug Info | [33] | |||
22 | 1-Phenyl-1H-benzoimidazole | Drug Info | [33] | |||
23 | 2-(1H-indazol-3-yl)-1H-benzo[d]imidazole | Drug Info | [34] | |||
24 | 3-((E)-Styryl)-quinoline | Drug Info | [30] | |||
25 | 3-(1H-Indol-3-yl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
26 | 3-(1H-Indol-3-yl)-quinoline | Drug Info | [30] | |||
27 | 3-(2-Cyclohexyl-ethyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
28 | 3-(3,4-Dichloro-phenyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
29 | 3-(3,4-Difluoro-phenyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
30 | 3-(3,4-Dimethoxy-phenyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
31 | 3-(3-Fluoro-phenyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
32 | 3-(4-dimethylamino-benzylidenyl)-2-indolinone | Drug Info | [35] | |||
33 | 3-(4-Fluoro-phenyl)-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
34 | 3-(6,7-Dimethoxy-quinolin-4-yloxy)-phenol | Drug Info | [36] | |||
35 | 3-(6,7-Dimethoxy-quinolin-4-yloxy)-phenylamine | Drug Info | [36] | |||
36 | 3-Benzimidazol-2-ylhydroquinolin-2-one | Drug Info | [37] | |||
37 | 3-Benzyloxy-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
38 | 3-Cyclohexylethynyl-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
39 | 3-Cyclopent-1-enyl-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
40 | 3-Cyclopentyl-6,7-dimethoxy-quinoline | Drug Info | [30] | |||
41 | 3-Pyridin-3-yl-quinoline-6,7-diol | Drug Info | [30] | |||
42 | 3-Pyridin-4-yl-quinolin-7-ol | Drug Info | [38] | |||
43 | 3-Pyridin-4-yl-quinoline | Drug Info | [38] | |||
44 | 3-Pyridin-4-yl-quinoline-5,7-diol | Drug Info | [38] | |||
45 | 3-Thiophen-3-yl-quinoline | Drug Info | [30] | |||
46 | 4-(2,3-Dimethoxy-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
47 | 4-(3,4-Dimethoxy-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
48 | 4-(3,5-Dimethoxy-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
49 | 4-(3-Bromo-phenoxy)-6,7-dimethoxy-quinazoline | Drug Info | [36] | |||
50 | 4-(3-Bromo-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
51 | 4-(3-Ethoxy-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
52 | 4-(3-Ethyl-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
53 | 4-(3-Fluoro-phenoxy)-6,7-dimethoxy-quinoline | Drug Info | [36] | |||
54 | 4-(5-Methoxy-benzoimidazol-1-yl)-phenylamine | Drug Info | [39] | |||
55 | 4-(6,7-Dimethoxy-quinolin-3-yl)-benzoic acid | Drug Info | [30] | |||
56 | 4-(6,7-Dimethoxy-quinolin-3-yl)-phenol | Drug Info | [30] | |||
57 | 4-Benzoimidazol-1-yl-phenylamine | Drug Info | [33] | |||
58 | 5,6,7-Trimethoxy-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
59 | 5,7-Dimethoxy-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
60 | 5,7-Dimethoxy-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
61 | 5,7-Dimethyl-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
62 | 5-(6,7-Dimethoxy-quinolin-3-yl)-1H-pyridin-2-one | Drug Info | [30] | |||
63 | 5-Methoxy-1-phenyl-1H-benzoimidazole | Drug Info | [33] | |||
64 | 6,7-Dichloro-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
65 | 6,7-Difluoro-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
66 | 6,7-Dimethoxy-3-((E)-styryl)-quinoline | Drug Info | [30] | |||
67 | 6,7-Dimethoxy-3-(3-methoxy-phenyl)-quinoline | Drug Info | [30] | |||
68 | 6,7-Dimethoxy-3-(4-methoxy-phenyl)-quinoline | Drug Info | [30] | |||
69 | 6,7-Dimethoxy-3-(4-nitro-phenyl)-quinoline | Drug Info | [30] | |||
70 | 6,7-Dimethoxy-3-p-tolyl-quinoline | Drug Info | [30] | |||
71 | 6,7-Dimethoxy-3-phenyl-quinoline | Drug Info | [30] | |||
72 | 6,7-Dimethoxy-3-phenylethynyl-quinoline | Drug Info | [30] | |||
73 | 6,7-Dimethoxy-3-pyridin-3-yl-quinoline | Drug Info | [30] | |||
74 | 6,7-Dimethoxy-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
75 | 6,7-Dimethoxy-3-thiophen-2-yl-quinoline | Drug Info | [30] | |||
76 | 6,7-Dimethoxy-4-(2-methoxy-phenoxy)-quinoline | Drug Info | [36] | |||
77 | 6,7-Dimethoxy-4-(3-methoxy-phenoxy)-quinoline | Drug Info | [36] | |||
78 | 6,7-Dimethoxy-4-(3-nitro-phenoxy)-quinoline | Drug Info | [36] | |||
79 | 6,7-Dimethoxy-4-(4-methoxy-phenoxy)-quinoline | Drug Info | [36] | |||
80 | 6,7-Dimethoxy-4-m-tolyloxy-quinoline | Drug Info | [36] | |||
81 | 6,7-Dimethoxy-4-phenoxy-quinoline | Drug Info | [36] | |||
82 | 6-Methoxy-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
83 | 6-Methoxy-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
84 | 7-Chloro-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
85 | 7-Fluoro-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
86 | 7-Methoxy-3-pyridin-4-yl-quinoline | Drug Info | [38] | |||
87 | 7-Methoxy-3-thiophen-3-yl-quinoline | Drug Info | [30] | |||
88 | 7-Thiophen-3-yl-[1,3]dioxolo[4,5-g]quinoline | Drug Info | [30] | |||
89 | AGL 2043 | Drug Info | [40] | |||
90 | Benzyl-(6,7-dimethoxy-quinolin-3-yl)-amine | Drug Info | [30] | |||
91 | Bis(5-acetoxybenzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
92 | Bis(5-aminobenzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
93 | Bis(5-hydroxybenzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
94 | Bis(5-methoxybenzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
95 | Bis(6-hydroxybenzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
96 | Bis(benzo[b]furan-2-yl)methanone | Drug Info | [29] | |||
97 | Bis-(5-hydroxy-1H-indol-2-yl)-methanone | Drug Info | [31] | |||
98 | BMS-536924 | Drug Info | [41] | |||
99 | CP-673451 | Drug Info | [42] | |||
100 | Di(1H-indol-2-yl)methanone | Drug Info | [31] | |||
101 | GTP-14564 | Drug Info | [43] | |||
102 | HKI-9924129 | Drug Info | [44] | |||
103 | JNJ-10198409 | Drug Info | [32] | |||
104 | Ki-11502 | Drug Info | [45] | |||
105 | Ki-20227 | Drug Info | [46] | |||
106 | PD-0166326 | Drug Info | [44] | |||
107 | PD-0173952 | Drug Info | [44] | |||
108 | PD-0173955 | Drug Info | [44] | |||
109 | PD-0173956 | Drug Info | [44] | |||
110 | PD-0173958 | Drug Info | [44] | |||
111 | PD-0179483 | Drug Info | [44] | |||
112 | PDGF receptor tyrosine kinase inhibitor III | Drug Info | [47] | |||
113 | PMID22765894C8h | Drug Info | [48] | |||
114 | Ro-4396686 | Drug Info | [49] | |||
115 | RPR-101511 | Drug Info | [30] | |||
116 | RPR-108514A | Drug Info | [50] | |||
117 | SU-11652 | Drug Info | [1] | |||
118 | TG-100435 | Drug Info | [51] |
Cell-based Target Expression Variations | Top | |||||
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Cell-based Target Expression Variations |
Drug Binding Sites of Target | Top | |||||
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Ligand Name: 2-(Acetylamino)-2-Deoxy-a-D-Glucopyranose | Ligand Info | |||||
Structure Description | The structure of a platelet derived growth factor receptor complex | PDB:3MJG | ||||
Method | X-ray diffraction | Resolution | 2.30 Å | Mutation | No | [53] |
PDB Sequence |
LVVTPPGPEL
42 VLNVSSTFVL52 TCSGSAPVVW62 ERMSQEPPQE72 MAKAQDGTFS82 SVLTLTNLTG 92 LDTGEYFCTH102 NDDERKRLYI118 FVPDPTVGFL128 PNDAEELFIF138 LTEITEITIP 148 CRVTDPQLVV158 TLHEKKGDVA168 LPVPYDHQRG178 FSGIFEDRSY188 ICKTTIGDRE 198 VDSDAYYVYR208 LQVSSINVSV218 NAVQTVVRQG228 ENITLMCIVI238 GNEVVNFEWT 248 YPRKESGRLV258 EPVTDFLLDM268 PYHIRSILHI278 PSAELEDSGT288 YTCNVTESVN 298 DHQDEKAINI308 TVVE
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Click to View More Binding Site Information of This Target with Different Ligands |
Different Human System Profiles of Target | Top |
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Human Similarity Proteins
of target is determined by comparing the sequence similarity of all human proteins with the target based on BLAST. The similarity proteins for a target are defined as the proteins with E-value < 0.005 and outside the protein families of the target.
A target that has fewer human similarity proteins outside its family is commonly regarded to possess a greater capacity to avoid undesired interactions and thus increase the possibility of finding successful drugs
(Brief Bioinform, 21: 649-662, 2020).
Human Tissue Distribution
of target is determined from a proteomics study that quantified more than 12,000 genes across 32 normal human tissues. Tissue Specificity (TS) score was used to define the enrichment of target across tissues.
The distribution of targets among different tissues or organs need to be taken into consideration when assessing the target druggability, as it is generally accepted that the wider the target distribution, the greater the concern over potential adverse effects
(Nat Rev Drug Discov, 20: 64-81, 2021).
Human Pathway Affiliation
of target is determined by the life-essential pathways provided on KEGG database. The target-affiliated pathways were defined based on the following two criteria (a) the pathways of the studied target should be life-essential for both healthy individuals and patients, and (b) the studied target should occupy an upstream position in the pathways and therefore had the ability to regulate biological function.
Targets involved in a fewer pathways have greater likelihood to be successfully developed, while those associated with more human pathways increase the chance of undesirable interferences with other human processes
(Pharmacol Rev, 58: 259-279, 2006).
Biological Network Descriptors
of target is determined based on a human protein-protein interactions (PPI) network consisting of 9,309 proteins and 52,713 PPIs, which were with a high confidence score of ≥ 0.95 collected from STRING database.
The network properties of targets based on protein-protein interactions (PPIs) have been widely adopted for the assessment of target’s druggability. Proteins with high node degree tend to have a high impact on network function through multiple interactions, while proteins with high betweenness centrality are regarded to be central for communication in interaction networks and regulate the flow of signaling information
(Front Pharmacol, 9, 1245, 2018;
Curr Opin Struct Biol. 44:134-142, 2017).
Human Similarity Proteins
Human Tissue Distribution
Human Pathway Affiliation
Biological Network Descriptors
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Note:
If a protein has TS (tissue specficity) scores at least in one tissue >= 2.5, this protein is called tissue-enriched (including tissue-enriched-but-not-specific and tissue-specific). In the plots, the vertical lines are at thresholds 2.5 and 4.
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KEGG Pathway | Pathway ID | Affiliated Target | Pathway Map |
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MAPK signaling pathway | hsa04010 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Ras signaling pathway | hsa04014 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Rap1 signaling pathway | hsa04015 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Calcium signaling pathway | hsa04020 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Phospholipase D signaling pathway | hsa04072 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
PI3K-Akt signaling pathway | hsa04151 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Focal adhesion | hsa04510 | Affiliated Target |
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Class: Cellular Processes => Cellular community - eukaryotes | Pathway Hierarchy | ||
Gap junction | hsa04540 | Affiliated Target |
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Class: Cellular Processes => Cellular community - eukaryotes | Pathway Hierarchy | ||
JAK-STAT signaling pathway | hsa04630 | Affiliated Target |
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Class: Environmental Information Processing => Signal transduction | Pathway Hierarchy | ||
Regulation of actin cytoskeleton | hsa04810 | Affiliated Target |
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Class: Cellular Processes => Cell motility | Pathway Hierarchy | ||
Click to Show/Hide the Information of Affiliated Human Pathways |
Degree | 34 | Degree centrality | 3.65E-03 | Betweenness centrality | 7.15E-04 |
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Closeness centrality | 2.48E-01 | Radiality | 1.43E+01 | Clustering coefficient | 2.10E-01 |
Neighborhood connectivity | 4.97E+01 | Topological coefficient | 7.70E-02 | Eccentricity | 12 |
Download | Click to Download the Full PPI Network of This Target | ||||
Chemical Structure based Activity Landscape of Target | Top |
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Drug Property Profile of Target | Top | |
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(1) Molecular Weight (mw) based Drug Clustering | (2) Octanol/Water Partition Coefficient (xlogp) based Drug Clustering | |
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(3) Hydrogen Bond Donor Count (hbonddonor) based Drug Clustering | (4) Hydrogen Bond Acceptor Count (hbondacc) based Drug Clustering | |
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(5) Rotatable Bond Count (rotbonds) based Drug Clustering | (6) Topological Polar Surface Area (polararea) based Drug Clustering | |
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"RO5" indicates the cutoff set by lipinski's rule of five; "D123AB" colored in GREEN denotes the no violation of any cutoff in lipinski's rule of five; "D123AB" colored in PURPLE refers to the violation of only one cutoff in lipinski's rule of five; "D123AB" colored in BLACK represents the violation of more than one cutoffs in lipinski's rule of five |
Co-Targets | Top | |||||
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Co-Targets |
Target Poor or Non Binders | Top | |||||
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Target Poor or Non Binders |
Target Regulators | Top | |||||
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Target-regulating microRNAs | ||||||
Target-interacting Proteins |
Target Profiles in Patients | Top | |||||
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Target Expression Profile (TEP) |
Target-Related Models and Studies | Top | |||||
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Target Validation |
References | Top | |||||
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REF 1 | Discovery of 5-[5-fluoro-2-oxo-1,2- dihydroindol-(3Z)-ylidenemethyl]-2,4- dimethyl-1H-pyrrole-3-carboxylic acid (2-diethylaminoethyl)amide, a novel... J Med Chem. 2003 Mar 27;46(7):1116-9. | |||||
REF 2 | Emerging drugs for diabetic foot ulcers. Expert Opin Emerg Drugs. 2006 Nov;11(4):709-24. | |||||
REF 3 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 6974). | |||||
REF 4 | 2008 FDA drug approvals. Nat Rev Drug Discov. 2009 Feb;8(2):93-6. | |||||
REF 5 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 5711). | |||||
REF 6 | Sorafenib (BAY 43-9006, Nexavar), a dual-action inhibitor that targets RAF/MEK/ERK pathway in tumor cells and tyrosine kinases VEGFR/PDGFR in tumor vasculature. Methods Enzymol. 2006;407:597-612. | |||||
REF 7 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 7649). | |||||
REF 8 | ClinicalTrials.gov (NCT02135107) A Double-blind Comparative Study of the Efficacy and Safety of E3810 10mg Once and Twice Daily in Maintenance Therapy for PPI Resistant Gastroesophageal Reflux Disease Patients. U.S. National Institutes of Health. | |||||
REF 9 | URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 7886). | |||||
REF 10 | Metabolism and bioactivation of famitinib, a novel inhibitor of receptor tyrosine kinase, in cancer patients. Br J Pharmacol. 2013 Apr;168(7):1687-706. | |||||
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