Target Binding Site Detail
| Target General Information | Top | ||||
|---|---|---|---|---|---|
| Target ID | T81409 | Target Info | |||
| Target Name | Septin-6 (SEPT6) | ||||
| Synonyms | KIAA0128 | ||||
| Target Type | Literature-reported Target | ||||
| Gene Name | SEPTIN6 | ||||
| UniProt ID | |||||
| Ligand General Information | Top | ||||
|---|---|---|---|---|---|
| Ligand Name | Guanosine-5'-Diphosphate | Ligand Info | |||
| Canonical SMILES | C1=NC2=C(N1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N | ||||
| InChI | 1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1 | ||||
| InChIKey | QGWNDRXFNXRZMB-UUOKFMHZSA-N | ||||
| PubChem Compound ID | 135398619 | ||||
| Drug Binding Sites of Target | Top | |||||
|---|---|---|---|---|---|---|
| PDB ID: 7M6J Human Septin Hexameric Complex SEPT2G/SEPT6/SEPT7 by Single Particle Cryo-EM | ||||||
| Method | Electron microscopy | Resolution | 3.60 Å | Mutation | No | [1] |
| PDB Sequence |
VGFDSLPDQL
32 VNKSVSQGFC42 FNILCVGETG52 LGKSTLMDTL62 FNTKFEGEPA72 THTQPGVQLQ 82 SNTYDLQESN92 VRLKLTIVST102 VGFGDQINKE112 DSYKPIVEFI122 DAQFEAYLQE 132 ELKIRRVLHT142 YHDSRIHVCL152 YFIAPTGHSL162 KSLDLVTMKK172 LDSKVNIIPI 182 IAKADAISKS192 ELTKFKIKIT202 SELVSNGVQI212 YQFPTDDESV222 AEINGTMNAH 232 LPFAVIGSTE242 ELKIGNKMMR252 ARQYPWGTVQ262 VENEAHCDFV272 KLREMLIRVN 282 MEDLREQTHT292 RHYELYRRCK302 LEEMGFK
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| PDB ID: 2QAG Crystal structure of human septin trimer 2/6/7 | ||||||
| Method | X-ray diffraction | Resolution | 4.00 Å | Mutation | No | [2] |
| PDB Sequence |
VPLAGHVFDP
29 DQLVNKSVSG40 FCFNILCVGE50 TGLGKSTLMD60 TLFNTKFTQP77 GVQLQSNTYD 87 LQEVRLKLTI99 VSTVGFGDIN110 KEDSYKPIVE120 FIDAQFEAYL130 QEEIRRVLHT 142 YHDIHVCLYF154 IAPTGKSLDL167 VTMKKLDSKV177 NIIPIIAKAD187 AISKSELTKF 197 KIKITSELVS207 NGVQIYQFPV222 AEINGTMNAH232 PFAVIGNKMM251 PWGTVQHCDF 271 VKLREMLIRV281 NMEDLREQTH291 TRHYELYRRC301 KLEEMG
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| PDB ID: 6UPA Crystal Structure of GTPase Domain of Human Septin 2/Septin 6 Heterocomplex | ||||||
| Method | X-ray diffraction | Resolution | 2.51 Å | Mutation | No | [3] |
| PDB Sequence |
FCFNILCVGE
50 TGLGKSTLMD60 TLFNTKFEPA72 THTQPGVQLQ82 SNTYDLRLKL97 TIVSTVGFGD 107 QINKEDSYKP117 IVEFIDAQFE127 AYLQEELKIR137 RVLHTYHDSR147 IHVCLYFIAP 157 TGHSLKSLDL167 VTMKKLDSKV177 NIIPIIAKAD187 AISKSELTKF197 KIKITSELVS 207 NGVQIYQFPT217 DDESVAEING227 TMNAHLPFAV237 IGSTEELKIG247 NKMMRARQYP 257 WGTVQVENEA267 HCDFVKLREM277 LIRVNMEDLR287 EQTHTRHYEL297 YRRCKLEE |
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| References | Top | ||||
|---|---|---|---|---|---|
| REF 1 | An atomic model for the human septin hexamer by cryo-EM. J Mol Biol. 2021 Jul 23;433(15):167096. | ||||
| REF 2 | Structural insight into filament formation by mammalian septins. Nature. 2007 Sep 20;449(7160):311-5. | ||||
| REF 3 | Molecular Recognition at Septin Interfaces: The Switches Hold the Key. J Mol Biol. 2020 Oct 2;432(21):5784-5801. | ||||
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