Target Binding Site Detail
| Target General Information | Top | ||||
|---|---|---|---|---|---|
| Target ID | T69612 | Target Info | |||
| Target Name | G protein-coupled receptor kinase 5 (GRK5) | ||||
| Synonyms | GPRK5; G protein-coupled receptor kinase GRK5 | ||||
| Target Type | Patented-recorded Target | ||||
| Gene Name | GRK5 | ||||
| UniProt ID | |||||
| Ligand General Information | Top | ||||
|---|---|---|---|---|---|
| Ligand Name | Sangivamycin | Ligand Info | |||
| Canonical SMILES | C1=C(C2=C(N=CN=C2N1C3C(C(C(O3)CO)O)O)N)C(=O)N | ||||
| InChI | 1S/C12H15N5O5/c13-9-6-4(10(14)21)1-17(11(6)16-3-15-9)12-8(20)7(19)5(2-18)22-12/h1,3,5,7-8,12,18-20H,2H2,(H2,14,21)(H2,13,15,16)/t5-,7-,8-,12-/m1/s1 | ||||
| InChIKey | OBZJZDHRXBKKTJ-JTFADIMSSA-N | ||||
| PubChem Compound ID | 14978 | ||||
| Drug Binding Sites of Target | Top | |||||
|---|---|---|---|---|---|---|
| PDB ID: 4TNB Crystal Structure of G Protein-Coupled Receptor Kinase 5 in Complex with Sangivamycin | ||||||
| Method | X-ray diffraction | Resolution | 2.11 Å | Mutation | No | [1] |
| PDB Sequence |
AREGGGGKRK
24 GKSKKWKEIL34 KFPHISQCED44 LRRTIDRDYC54 SLCDKQPIGR64 LLFRQFCETR 74 PGLECYIQFL84 DSVAEYEVTP94 DEKLGEKGKK104 IMTKYLTPKS114 PVFIAQVGQD 124 LVSQTEEKLL134 QKPCKELFSA144 CAQSVHEYLR154 GEPFHEYLDS164 MFFDRFLQWK 174 WLERQPVTKN184 TFRQYRVLGK194 GGFGEVCACQ204 VRATGKMYAC214 KRLEKKRIKK 224 RKGESMALNE234 KQILEKVNSQ244 FVVNLAYAYE254 TKDALCLVLT264 IMNGGDLKFH 274 IYNMGNPGFE284 EERALFYAAE294 ILCGLEDLHH304 ENTVYRDLKP314 ENILLDDYGH 324 IRISDLGLAV334 KIPEGDLIRG344 RVGTVGYMAP354 EVLNNQRYGL364 SPDYWGLGCL 374 IYEMIEGQSP384 FRGRKEKVKR394 EEVDRRVLET404 EEVYSHKFSE414 EAKSICKMLL 424 TKDAKQRLGC434 QEEEAAEVKR444 HPFFRNMNFK454 RLEAGMLDPP464 FVPDPRAVYC 474 KDVLDIEQFS484 TVKGVNLDHT494 DDDFYSKFST504 GSVSIPWQNE514 MIETECFKEL 524 NVFGPNGTLP534 PDLNRNHPP
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| PDB ID: 6PJX Crystal Structure of G Protein-Coupled Receptor Kinase 5 (GRK5) in Complex with Calmodulin (CaM) | ||||||
| Method | X-ray diffraction | Resolution | 1.96 Å | Mutation | Yes | [2] |
| PDB Sequence |
MELENIVANT
10 VLLKAREGGG20 GKRKGKSKKW30 KEILKFPHIS40 QCEDLRRTID50 RDYCSLCDKQ 60 PIGRLLFRQF70 CETRPGLECY80 IQFLDSVAEY90 EVTPDEKLGE100 KGKKIMTKYL 110 TPKSPVFIAQ120 VGQDLVSQTE130 EKLLQKPCKE140 LFSACAQSVH150 EYLRGEPFHE 160 YLDSMFFDRF170 LQWKWLERQP180 VTKNTFRQYR190 VLGKGGFGEV200 CACQVRATGK 210 MYACKRLEKK220 RIKKRKGESM230 ALNEKQILEK240 VNSQFVVNLA250 YAYETKDALC 260 LVLTIMNGGD270 LKFHIYNMGN280 PGFEEERALF290 YAAEILCGLE300 DLHHENTVYR 310 DLKPENILLD320 DYGHIRISDL330 GLAVKIPEGD340 LIRGRVGTVG350 YMAPEVLNNQ 360 RYGLSPDYWG370 LGCLIYEMIE380 GQSPFRGRKE390 KVKREEVDRR400 VLETEEVYSH 410 KFSEEAKSIC420 KMLLTKDAKQ430 RLGCQEEEAA440 EVKRHPFFRN450 MNFKRLEAGM 460 LDPPFVPDPR470 AVYCKDVLDI480 EQFSTVKGVN490 LDHTDDDFYS500 KFSTGSVSIP 510 WQNEMIETEC520 FKELNVFGPN530 GTLPPDLNRN540 HP
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| References | Top | ||||
|---|---|---|---|---|---|
| REF 1 | Atomic Structure of GRK5 Reveals Distinct Structural Features Novel for G Protein-coupled Receptor Kinases. J Biol Chem. 2015 Aug 21;290(34):20629-20647. | ||||
| REF 2 | Structure of a GRK5-Calmodulin Complex Reveals Molecular Mechanism of GRK Activation and Substrate Targeting. Mol Cell. 2021 Jan 21;81(2):323-339.e11. | ||||
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