Target Binding Site Detail
Target General Information | Top | ||||
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Target ID | T62746 | Target Info | |||
Target Name | Rotamase F (PPIF) | ||||
Synonyms | Peptidylprolyl cistrans isomerase F, mitochondrial; Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; Mitochondrial cyclophilin; Cyclophilin F; CyPM; CyP-M; CyP-D; CYP3 | ||||
Target Type | Literature-reported Target | ||||
Gene Name | PPIF | ||||
Biochemical Class | Cis-trans-isomerase | ||||
UniProt ID |
Ligand General Information | Top | ||||
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Ligand Name | 1313212-89-3 | Ligand Info | |||
Canonical SMILES | CCOC(=O)CNC(=O)NCC1=CC=C(C=C1)N | ||||
InChI | 1S/C12H17N3O3/c1-2-18-11(16)8-15-12(17)14-7-9-3-5-10(13)6-4-9/h3-6H,2,7-8,13H2,1H3,(H2,14,15,17) | ||||
InChIKey | UCMPTJMHPJQEED-UHFFFAOYSA-N | ||||
PubChem Compound ID | 53259809 |
Drug Binding Sites of Target | Top | |||||
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PDB ID: 3RDC Human Cyclophilin D Complexed with an Inhibitor | ||||||
Method | X-ray diffraction | Resolution | 1.94 Å | Mutation | Yes | [1] |
PDB Sequence |
GNPLVYLDVD
53 ANGKPLGRVV63 LELKADVVPK73 TAENFRALCT83 GEKGFGYKGS93 TFHRVIPSFM 103 CQAGDFTNHN113 GTGGKSIYGS123 RFPDENFTLK133 HVGPGVLSMA143 NAGPNTNGSQ 153 FFICTIKTDW163 LDGKHVVFGH173 VIEGMDVVKK183 IESFGSKSGR193 TSKKIVITDC 203 GQLS
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PDB ID: 4ZSC Human Cyclophilin D Complexed with an Inhibitor at room temperature | ||||||
Method | X-ray diffraction | Resolution | 1.50 Å | Mutation | Yes | [1] |
PDB Sequence |
GNPLVYLDVD
53 ANGKPLGRVV63 LELKADVVPK73 TAENFRALCT83 GEKGFGYKGS93 TFHRVIPSFM 103 CQAGDFTNHN113 GTGGKSIYGS123 RFPDENFTLK133 HVGPGVLSMA143 NAGPNTNGSQ 153 FFICTIKTDW163 LDGKHVVFGH173 VIEGMDVVKK183 IESFGSKSGR193 TSKKIVITDC 203 GQLS
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PDB ID: 4XNC Crystal structure at room temperature of cyclophilin D in complex with an inhibitor | ||||||
Method | X-ray diffraction | Resolution | 2.23 Å | Mutation | Yes | [1] |
PDB Sequence |
GNPLVYLDVD
53 ANGKPLGRVV63 LELKADVVPK73 TAENFRALCT83 GEKGFGYKGS93 TFHRVIPSFM 103 CQAGDFTNHN113 GTGGKSIYGS123 RFPDENFTLK133 HVGPGVLSMA143 NAGPNTNGSQ 153 FFICTIKTDW163 LDGKHVVFGH173 VIEGMDVVKK183 IESFGSKSGR193 TSKKIVITDC 203 GQLS
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References | Top | ||||
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REF 1 | Combining 'dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography. Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1777-87. |
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