Target Binding Site Detail

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Target General Information
Ligand General Information
Drug Binding Sites of Target
References
Target General Information  Top
Target ID T58080 Target Info
Target Name Beta-2-microglobulin (B2M)
Synonyms Beta-2-microglobulin
Target Type Literature-reported Target
Gene Name B2M
UniProt ID
B2MG_HUMAN
Ligand General Information  Top
Ligand Name Urea Ligand Info
Canonical SMILES C(=O)(N)N
InChI 1S/CH4N2O/c2-1(3)4/h(H4,2,3,4)
InChIKey XSQUKJJJFZCRTK-UHFFFAOYSA-N
PubChem Compound ID 1176
Drug Binding Sites of Target  Top
PDB ID: 1XR9      Crystal Structures of HLA-B*1501 in Complex with Peptides from Human UbcH6 and Epstein-Barr Virus EBNA-3
Method X-ray diffraction Resolution 1.79 Å Mutation No [1]
PDB Sequence
IQRTPKIQVY
10
SRHPAENGKS
20
NFLNCYVSGF
30
HPSDIEVDLL
40
KNGERIEKVE
50

HSDLSFSKDW
60
SFYLLYYTEF
70
TPTEKDEYAC
80
RVNHVTLSQP
90
KIVKWDRDM
Residue
Distance (Å)
TYR10
3.908
SER11
2.871
ARG12
4.075
HIS13
3.573
Residue
Distance (Å)
PRO14
3.576
ARG97
4.436
MET99
4.425
PDB ID: 1XR8      Crystal Structures of HLA-B*1501 in Complex with Peptides from Human UbcH6 and Epstein-Barr Virus EBNA-3
Method X-ray diffraction Resolution 2.30 Å Mutation No [1]
PDB Sequence
IQRTPKIQVY
10
SRHPAENGKS
20
NFLNCYVSGF
30
HPSDIEVDLL
40
KNGERIEKVE
50

HSDLSFSKDW
60
SFYLLYYTEF
70
TPTEKDEYAC
80
RVNHVTLSQP
90
KIVKWDRDM
Residue
Distance (Å)
TYR10
3.901
SER11
3.175
ARG12
4.865
HIS13
4.105
Residue
Distance (Å)
PRO14
3.922
ARG97
3.770
MET99
4.141
References  Top
REF 1 Crystal structures of two peptide-HLA-B*1501 complexes; structural characterization of the HLA-B62 supertype. Acta Crystallogr D Biol Crystallogr. 2006 Nov;62(Pt 11):1300-10.

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