Target Binding Site Detail
| Target General Information | Top | ||||
|---|---|---|---|---|---|
| Target ID | T42822 | Target Info | |||
| Target Name | Ferrochelatase (FECH) | ||||
| Synonyms | Protoheme ferro-lyase; Heme synthetase; FECH | ||||
| Target Type | Successful Target | ||||
| Gene Name | FECH | ||||
| Biochemical Class | Ferrochelatase | ||||
| UniProt ID | |||||
| Ligand General Information | Top | ||||
|---|---|---|---|---|---|
| Ligand Name | Cholic acid | Ligand Info | |||
| Canonical SMILES | CC(CCC(=O)O)C1CCC2C1(C(CC3C2C(CC4C3(CCC(C4)O)C)O)O)C | ||||
| InChI | 1S/C24H40O5/c1-13(4-7-21(28)29)16-5-6-17-22-18(12-20(27)24(16,17)3)23(2)9-8-15(25)10-14(23)11-19(22)26/h13-20,22,25-27H,4-12H2,1-3H3,(H,28,29)/t13-,14+,15-,16-,17+,18+,19-,20+,22+,23+,24-/m1/s1 | ||||
| InChIKey | BHQCQFFYRZLCQQ-OELDTZBJSA-N | ||||
| PubChem Compound ID | 221493 | ||||
| Drug Binding Sites of Target | Top | |||||
|---|---|---|---|---|---|---|
| PDB ID: 3W1W Protein-drug complex | ||||||
| Method | X-ray diffraction | Resolution | 2.01 Å | Mutation | Yes | [1] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
|
MET76
3.716
PHE88
4.018
LEU89
4.203
LEU92
3.693
PHE93
3.700
LEU98
3.205
MET99
3.714
THR100
2.730
LEU101
3.689
PRO102
3.220
LEU107
3.644
PHE110
4.699
ILE111
3.960
ARG114
3.152
LEU115
3.319
ILE119
3.857
GLN122
4.049
SER197
3.087
|
|||||
| PDB ID: 4KLR E343Q variant of human ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 2.18 Å | Mutation | Yes | [2] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIQT344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
|
||||||
| PDB ID: 4KMM M76H variant of human ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 2.60 Å | Mutation | Yes | [3] |
| PDB Sequence |
RKPKTGILML
74 NHGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
|
||||||
| PDB ID: 3HCN Hg and protoporphyrin bound Human Ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 1.60 Å | Mutation | No | [4] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
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|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:93 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:111 or .A:114 or .A:115 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
| PDB ID: 2HRC 1.7 angstrom structure of human ferrochelatase variant R115L | ||||||
| Method | X-ray diffraction | Resolution | 1.70 Å | Mutation | Yes | [5] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:197 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:272 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.757
PHE88
4.155
LEU89
4.222
LEU92
3.475
PHE93
3.748
LEU98
3.245
MET99
3.730
THR100
3.209
LEU101
3.934
PRO102
3.899
LEU107
3.783
PHE110
4.289
ILE111
4.203
ARG114
2.922
LEU115
3.385
|
|||||
| PDB ID: 3AQI H240A variant of human ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 1.70 Å | Mutation | Yes | [6] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADAILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:197 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.812
PHE88
4.080
LEU89
4.188
LEU92
3.483
PHE93
3.813
LEU98
3.524
MET99
3.512
THR100
3.750
LEU101
4.262
PRO102
3.846
LEU107
3.904
PHE110
4.528
ILE111
4.010
ARG114
2.437
LEU115
4.037
|
|||||
| PDB ID: 3HCO Human ferrochelatase with Cd and protoporphyrin IX bound | ||||||
| Method | X-ray diffraction | Resolution | 1.80 Å | Mutation | No | [4] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:111 or .A:114 or .A:115 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
| PDB ID: 4F4D F337R variant of human ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 1.80 Å | Mutation | Yes | [7] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IARTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:118 or .A:119 or .A:122 or .A:165 or .A:191 or .A:197 or .A:198 or .A:263 or .A:266 or .A:268 or .A:305 or .A:306 or .A:308 or .A:310 or .A:337 or .A:343; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.709
PHE88
4.878
LEU89
3.605
LEU92
3.681
PHE93
4.173
LEU98
3.520
MET99
3.629
THR100
3.283
LEU101
4.182
PRO102
3.793
LEU107
3.888
PHE110
4.809
ILE111
3.780
ARG114
3.566
ARG115
2.713
LYS118
3.858
|
|||||
| PDB ID: 1HRK CRYSTAL STRUCTURE OF HUMAN FERROCHELATASE | ||||||
| Method | X-ray diffraction | Resolution | 2.00 Å | Mutation | Yes | [8] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:195 or .A:197 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:272 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.832
PHE88
4.142
LEU89
4.155
LEU92
3.391
PHE93
3.738
LEU98
3.690
MET99
3.553
THR100
4.411
LEU101
3.775
PRO102
3.987
LEU107
3.639
PHE110
4.399
ILE111
4.098
ARG114
2.803
LEU115
3.069
ILE119
3.831
|
|||||
| PDB ID: 2QD4 Wild type human ferrochelatase crystallized with MnCl2 | ||||||
| Method | X-ray diffraction | Resolution | 2.00 Å | Mutation | No | [9] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:197 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:303 or .A:305 or .A:306 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
4.011
PHE88
4.014
LEU89
4.413
LEU92
3.432
PHE93
3.662
LEU98
3.069
MET99
3.623
THR100
3.941
LEU101
3.759
PRO102
3.681
LEU107
3.782
PHE110
4.704
ILE111
3.769
ARG114
3.126
|
|||||
| PDB ID: 3HCP Human ferrochelatase with Mn and deuteroporphyrin bound | ||||||
| Method | X-ray diffraction | Resolution | 2.00 Å | Mutation | Yes | [4] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPAIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:80 or .A:81 or .A:93 or .A:99 or .A:100 or .A:101 or .A:111 or .A:114 or .A:115 or .A:126 or .A:127 or .A:128 or .A:129 or .A:130 or .A:131 or .A:134 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310 or .A:340 or .A:345; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
GLU80
3.398
THR81
4.351
PHE93
3.599
MET99
4.080
THR100
4.541
LEU101
3.769
ILE111
4.051
ARG114
3.331
ARG115
3.263
ILE126
3.420
GLY127
2.817
GLY128
3.991
GLY129
3.592
|
|||||
| PDB ID: 2PO5 Crystal structure of human ferrochelatase mutant with His 263 replaced by Cys | ||||||
| Method | X-ray diffraction | Resolution | 2.20 Å | Mutation | Yes | [10] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSACS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:197 or .A:265 or .A:266 or .A:268 or .A:269 or .A:272 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310 or .A:343; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.342
PHE88
4.082
LEU89
4.265
LEU92
3.457
PHE93
3.357
LEU98
3.491
MET99
3.523
THR100
4.755
LEU101
3.899
PRO102
4.768
LEU107
3.950
PHE110
3.771
ILE111
4.295
ARG114
2.775
LEU115
3.507
|
|||||
| PDB ID: 2PO7 Crystal structure of human ferrochelatase mutant with His 341 replaced by Cys | ||||||
| Method | X-ray diffraction | Resolution | 2.20 Å | Mutation | Yes | [10] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DQDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDCIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:195 or .A:197 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:272 or .A:274 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310 or .A:343; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.878
PHE88
4.053
LEU89
4.026
LEU92
3.506
PHE93
3.673
LEU98
3.757
MET99
3.647
THR100
4.541
LEU101
3.982
PRO102
3.770
LEU107
3.664
PHE110
4.237
ILE111
4.358
ARG114
2.746
LEU115
3.515
ILE119
3.852
GLN122
4.123
|
|||||
| PDB ID: 2QD2 F110A variant of human ferrochelatase with protoheme bound | ||||||
| Method | X-ray diffraction | Resolution | 2.20 Å | Mutation | Yes | [9] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPAIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:111 or .A:114 or .A:115 or .A:266 or .A:268 or .A:269 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
| PDB ID: 2QD3 Wild type human ferrochelatase crystallized with ammonium sulfate | ||||||
| Method | X-ray diffraction | Resolution | 2.20 Å | Mutation | No | [9] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:118 or .A:119 or .A:165 or .A:191 or .A:197 or .A:198 or .A:263 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:309 or .A:310 or .A:343; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.681
LEU89
3.822
LEU92
3.687
PHE93
3.427
LEU98
3.688
MET99
3.606
THR100
3.648
LEU101
3.629
PRO102
4.065
LEU107
4.123
PHE110
4.505
ILE111
4.078
ARG114
3.893
ARG115
3.243
LYS118
3.237
|
|||||
| PDB ID: 3HCR Human Ferrochelatase with deuteroporphyrin and Ni Bound | ||||||
| Method | X-ray diffraction | Resolution | 2.20 Å | Mutation | No | [4] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:93 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:111 or .A:114 or .A:115 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
| PDB ID: 2QD5 Structure of wild type human ferrochelatase in complex with a lead-porphyrin compound | ||||||
| Method | X-ray diffraction | Resolution | 2.30 Å | Mutation | No | [9] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:266 or .A:268 or .A:305 or .A:306 or .A:308 or .A:310; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
| PDB ID: 2PNJ Crystal structure of human ferrochelatase mutant with Phe 337 replaced by Ala | ||||||
| Method | X-ray diffraction | Resolution | 2.35 Å | Mutation | Yes | [10] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 LTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQPT218 MKWSTIDRWP 228 THHLLIQCFA238 DHILKELDHF248 PLEKRSEVVI258 LFSAHSLPMS268 VVNRGDPYPQ 278 EVSATVQKVM288 ERLEYCNPYR298 LVWQSKVGPM308 PWLGPQTDES318 IKGLCERGRK 328 NILLVPIAAT338 SDHIETLYEL348 DIEYSQVLAK358 ECGVENIRRA368 ESLNGNPLFS 378 KALADLVHSH388 IQSNELCSKQ398 LTLSCPLCVN408 PVCRETKSFF418 TSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:97 or .A:98 or .A:99 or .A:100 or .A:101 or .A:102 or .A:107 or .A:110 or .A:111 or .A:114 or .A:115 or .A:119 or .A:122 or .A:197 or .A:263 or .A:264 or .A:265 or .A:266 or .A:268 or .A:269 or .A:303 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.898
PHE88
4.130
LEU89
3.971
LEU92
3.596
PHE93
3.649
ASP97
4.566
LEU98
3.383
MET99
3.670
THR100
3.805
LEU101
4.239
PRO102
3.792
LEU107
3.753
PHE110
4.476
ILE111
4.055
ARG114
4.825
LEU115
4.082
|
|||||
| PDB ID: 4MK4 S197C variant of human ferrochelatase. | ||||||
| Method | X-ray diffraction | Resolution | 2.50 Å | Mutation | Yes | [11] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCCTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIET344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:100 or .A:101 or .A:111 or .A:115 or .A:118 or .A:119 or .A:165 or .A:191 or .A:197 or .A:198 or .A:263 or .A:265 or .A:266 or .A:268 or .A:269 or .A:272 or .A:303 or .A:305 or .A:306 or .A:307 or .A:310 or .A:343; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
4.051
PHE88
4.813
LEU89
3.982
LEU92
3.315
PHE93
3.975
LEU98
3.170
MET99
3.641
THR100
4.937
LEU101
4.867
ILE111
4.415
ARG115
2.698
LYS118
3.060
ILE119
3.509
TYR165
4.930
TYR191
4.862
|
|||||
| PDB ID: 4KLA E343D variant of human ferrochelatase | ||||||
| Method | X-ray diffraction | Resolution | 2.60 Å | Mutation | Yes | [12] |
| PDB Sequence |
RKPKTGILML
74 NMGGPETLGD84 VHDFLLRLFL94 DRDLMTLPIQ104 NKLAPFIAKR114 RTPKIQEQYR 124 RIGGGSPIKI134 WTSKQGEGMV144 KLLDELSPNT154 APHKYYIGFR164 YVHPLTEEAI 174 EEMERDGLER184 AIAFTQYPQY194 SCSTTGSSLN204 AIYRYYNQVG214 RKPTMKWSTI 224 DRWPTHHLLI234 QCFADHILKE244 LDHFPLEKRS254 EVVILFSAHS264 LPMSVVNRGD 274 PYPQEVSATV284 QKVMERLEYC294 NPYRLVWQSK304 VGPMPWLGPQ314 TDESIKGLCE 324 RGRKNILLVP334 IAFTSDHIDT344 LYELDIEYSQ354 VLAKECGVEN364 IRRAESLNGN 374 PLFSKALADL384 VHSHIQSNEL394 CSKQLTLSCP404 LCVNPVCRET414 KSFFTSQQL |
|||||
|
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .CHD or .CHD2 or .CHD3 or :3CHD;style chemicals stick;color identity;select .A:76 or .A:88 or .A:89 or .A:92 or .A:93 or .A:98 or .A:99 or .A:101 or .A:111 or .A:115 or .A:118 or .A:119 or .A:122 or .A:165 or .A:197 or .A:198 or .A:263 or .A:266 or .A:268 or .A:305 or .A:306 or .A:307 or .A:308 or .A:310 or .A:343; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
MET76
3.822
PHE88
4.979
LEU89
3.976
LEU92
3.682
PHE93
4.196
LEU98
3.657
MET99
3.465
LEU101
4.951
ILE111
4.759
ARG115
2.837
LYS118
3.641
ILE119
3.971
GLN122
4.988
|
|||||
| References | Top | ||||
|---|---|---|---|---|---|
| REF 1 | Salicylic acid induces mitochondrial injury by inhibiting ferrochelatase heme biosynthesis activity. Mol Pharmacol. 2013 Dec;84(6):824-33. | ||||
| REF 2 | E343Q variant of human ferrochelatase | ||||
| REF 3 | M76H variant of human ferrochelatase | ||||
| REF 4 | Product release rather than chelation determines metal specificity for ferrochelatase. J Mol Biol. 2009 Oct 23;393(2):308-19. | ||||
| REF 5 | Substrate interactions with human ferrochelatase. Proc Natl Acad Sci U S A. 2007 Feb 6;104(6):1789-93. | ||||
| REF 6 | H240A variant of human ferrochelatase | ||||
| REF 7 | F337R Variant of Human Ferrochelatase | ||||
| REF 8 | The 2.0 A structure of human ferrochelatase, the terminal enzyme of heme biosynthesis. Nat Struct Biol. 2001 Feb;8(2):156-60. | ||||
| REF 9 | A pi-helix switch selective for porphyrin deprotonation and product release in human ferrochelatase. J Mol Biol. 2007 Nov 2;373(4):1006-16. | ||||
| REF 10 | Altered orientation of active site residues in variants of human ferrochelatase. Evidence for a hydrogen bond network involved in catalysis. Biochemistry. 2007 Jul 10;46(27):7973-9. | ||||
| REF 11 | S197C variant of human ferrochelatase. | ||||
| REF 12 | E343D variant of human ferrochelatase | ||||
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