Target Binding Site Detail
| Target General Information | Top | ||||
|---|---|---|---|---|---|
| Target ID | T09215 | Target Info | |||
| Target Name | Mycobacterium Isocitrate lyase (MycB icl) | ||||
| Synonyms | Isocitratase; Isocitrase; ICL | ||||
| Target Type | Literature-reported Target | ||||
| Gene Name | MycB icl | ||||
| Biochemical Class | Carbon-carbon lyase | ||||
| UniProt ID | |||||
| Ligand General Information | Top | ||||
|---|---|---|---|---|---|
| Ligand Name | Glyoxalate, Glyoxylate | Ligand Info | |||
| Canonical SMILES | C(=O)C(=O)O | ||||
| InChI | 1S/C2H2O3/c3-1-2(4)5/h1H,(H,4,5) | ||||
| InChIKey | HHLFWLYXYJOTON-UHFFFAOYSA-N | ||||
| PubChem Compound ID | 760 | ||||
| Drug Binding Sites of Target | Top | |||||
|---|---|---|---|---|---|---|
| PDB ID: 6WSI Intact cis-2,3-epoxysuccinic acid bound to Isocitrate Lyase-1 from Mycobacterium tuberculosis | ||||||
| Method | X-ray diffraction | Resolution | 1.75 Å | Mutation | No | [1] |
| PDB Sequence |
MSVVGTPKSA
10 EQIQQEWDTN20 PRWKDVTRTY30 SAEDVVALQG40 SVVEEHTLAR50 RGAEVLWEQL 60 HDLEWVNALG70 ALTGNMAVQQ80 VRAGLKAIYL90 SGWQVAGDAN100 LSGHTYPDQS 110 LYPANSVPQV120 VRRINNALQR130 ADQIAKIEGD140 TSVENWLAPI150 VADGEAGFGG 160 ALNVYELQKA170 LIAAGVAGSH180 WEDQLASEKK190 CGHLGGKVLI200 PTQQHIRTLT 210 SARLAADVAD220 VPTVVIARTD230 AEAATLITSD240 VDERDQPFIT250 GERTREGFYR 260 TKNGIEPCIA270 RAKAYAPFAD280 LIWMETGTPD290 LEAARQFSEA300 VKAEYPDQML 310 AYNCSPSFNW320 KKHLDDATIA330 KFQKELAAMG340 FKFQFITLAG350 FHALNYSMFD 360 LAYGYAQNQM370 SAYVELQERE380 FAAEERGYTA390 TKHQREVGAG400 YFDRIATTVD 410 PNSSTTALTG420 STEEGQF
|
|||||
|
|
||||||
| PDB ID: 1F8I CRYSTAL STRUCTURE OF ISOCITRATE LYASE:NITROPROPIONATE:GLYOXYLATE COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS | ||||||
| Method | X-ray diffraction | Resolution | 2.25 Å | Mutation | Yes | [2] |
| PDB Sequence |
ASVVGTPKSA
10 EQIQQEWDTN20 PRWKDVTRTY30 SAEDVVALQG40 SVVEEHTLAR50 RGAEVLWEQL 60 HDLEWVNALG70 ALTGNMAVQQ80 VRAGLKAIYL90 SGWQVAGDAN100 LSGHTYPDQS 110 LYPANSVPQV120 VRRINNALQR130 ADQIAKIEGD140 TSVENWLAPI150 VADGEAGFGG 160 ALNVYELQKA170 LIAAGVAGSH180 WEDQLASEKK190 SGHLGGKVLI200 PTQQHIRTLT 210 SARLAADVAD220 VPTVVIARTD230 AEAATLITSD240 VDERDQPFIT250 GERTREGFYR 260 TKNGIEPCIA270 RAKAYAPFAD280 LIWMETGTPD290 LEAARQFSEA300 VKAEYPDQML 310 AYNCSPSFNW320 KKHLDDATIA330 KFQKELAAMG340 FKFQFITLAG350 FHALNYSMFD 360 LAYGYAQNQM370 SAYVELQERE380 FAAEERGYTA390 TKHQREVGAG400 YFDRIATTVD 410 PNSSTTALTG420 STEEGQF
|
|||||
|
|
||||||
| References | Top | ||||
|---|---|---|---|---|---|
| REF 1 | Covalent Inactivation of Mycobacterium tuberculosis Isocitrate Lyase by cis-2,3-Epoxy-Succinic Acid. ACS Chem Biol. 2021 Mar 19;16(3):463-470. | ||||
| REF 2 | Structure of isocitrate lyase, a persistence factor of Mycobacterium tuberculosis. Nat Struct Biol. 2000 Aug;7(8):663-8. | ||||
If You Find Any Error in Data or Bug in Web Service, Please Kindly Report It to Dr. Zhou and Dr. Zhang.