TTD_Target_ID Target_Name TTD_Drug_ID Drug_Name Drug_Highest_Status Drug_PubchemID Molecular_Formula Molecular_Weight Canonical_SMILES Activity Binder_Type T17048 DNA topoisomerase II alpha D0B7EB Etoposide Approved 36462 C29H32O13 588.6 C[C@@H]1OC[C@@H]2[C@@H](O1)[C@@H]([C@H]([C@@H](O2)O[C@H]3[C@H]4COC(=O)[C@@H]4[C@@H](C5=CC6=C(C=C35)OCO6)C7=CC(=C(C(=C7)OC)O)OC)O)O IC50 = 50000 nM Poor binder T17048 DNA topoisomerase II alpha D00VZF Merbarone Discontinued in Phase 2 4990817 C11H9N3O3S 263.27 C1=CC=C(C=C1)NC(=O)C2C(=O)NC(=S)NC2=O IC50 = 120000 nM Poor binder T17048 DNA topoisomerase II alpha B04CRY (3E)-5-Hydroxy-3-[(3,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-2-one Investigative 11414937 C15H10O6 286.24 C1=CC2=C(C=C1O)/C(=C\\C3=CC(=C(C(=C3)O)O)O)/C(=O)O2 IC50 = 120000 nM Poor binder T17048 DNA topoisomerase II alpha B0WHM9 (2R,4S,6R)-6-((3R,3Ar,5aS,6S,7S,9bR)-6-(3-hydroxypropyl)-3a,6,9b-trimethyl-7-(prop-1-en-2-yl)-2,3,3a,4,5,5a,6,7,8,9b-decahydro-1H-cyclopenta[a]naphthalen-3-yl)-2-methylheptane-1,4-diol Investigative 10961552 C30H52O3 460.7 C[C@H](C[C@H](C[C@@H](C)[C@H]1CC[C@@]2([C@@]1(CC[C@@H]3C2=CC[C@H]([C@]3(C)CCCO)C(=C)C)C)C)O)CO IC50 = 50400 nM Poor binder T17048 DNA topoisomerase II alpha B0Y3XW (E)-N-Methyl-2-(pyridin-2-ylmethylene)hydrazinecarbothioamide Investigative 5711011 C8H10N4S 194.26 CNC(=S)N/N=C/C1=CC=CC=N1 IC50 = 76000 nM Poor binder T17048 DNA topoisomerase II alpha B1HEQ6 2-(Benzylthio)-4-(3-chlorobenzylthio)-1,3,5-triazine-6(1H)-one Investigative 54578708 C17H14ClN3OS2 375.9 C1=CC=C(C=C1)CSC2=NC(=NC(=O)N2)SCC3=CC(=CC=C3)Cl IC50 = 54600 nM Poor binder T17048 DNA topoisomerase II alpha B1LI6T 2-Pyridinecarbaldehyde N-isopropylthiosemicarbazone # Investigative 9602564 C10H14N4S 222.31 CC(C)NC(=S)N/N=C/C1=CC=CC=N1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B1N0WS 5-Amino-7-[2-(diethylamino)ethylimino]-1,3,6-triphenylpyrimido[4,5-d]pyrimidine-2,4-dithione Investigative 72206053 C30H31N7S2 553.7 CCN(CC)CCN=C1N=C2C(=C(N1C3=CC=CC=C3)N)C(=S)N(C(=S)N2C4=CC=CC=C4)C5=CC=CC=C5 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B2S4UZ N-(2-Morpholin-4-ylethyl)quinolino[4,3-b]quinoxalin-6-amine Investigative 134130167 C21H21N5O 359.4 C1COCCN1CCNC2=NC3=CC=CC=C3C4=NC5=CC=CC=C5N=C42 IC50 = 100000 nM Poor binder T17048 DNA topoisomerase II alpha B3NQB2 [2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-4-oxochromen-3-yl] 7-[[2-[4-hydroxy-3-(hydroxymethyl)anilino]-2-oxoethyl]amino]-7-oxoheptanoate Investigative 72375750 C31H30N2O12 622.6 C1=CC(=C(C=C1C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)OC(=O)CCCCCC(=O)NCC(=O)NC4=CC(=C(C=C4)O)CO)O)O IC50 = 78900 nM Poor binder T17048 DNA topoisomerase II alpha B4DEZ3 4-Allyl-1-(1-(2-pyridyl)ethylidene)-3-thio-semicarbazide Investigative 5371064 C11H14N4S 234.32 C/C(=N\\NC(=S)NCC=C)/C1=CC=CC=N1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B4K6PQ 4-[3-(Tert-Butylamino)imidazo[1,2-a]pyridine-2-yl]benzoic acid Investigative 53380489 C18H19N3O2 309.4 CC(C)(C)NC1=C(N=C2N1C=CC=C2)C3=CC=C(C=C3)C(=O)O IC50 = 52660 nM Poor binder T17048 DNA topoisomerase II alpha B5BM6Q Schembl21810455 Investigative 137662151 C23H17N3O4S 431.5 C1=CC=C(C=C1)N2C(=C(C(=O)N(C2=S)C3=CC=CC=C3)C(=O)NC4=CC(=CC=C4)O)O IC50 = 200000 nM Poor binder T17048 DNA topoisomerase II alpha B5PXJ8 N',N'-Diethyl-N-quinolino[4,3-b]quinoxalin-6-ylethane-1,2-diamine Investigative 134130860 C21H23N5 345.4 CCN(CC)CCNC1=NC2=CC=CC=C2C3=NC4=CC=CC=C4N=C31 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B63OUV 4-Chloro-10,11-difluoro-5-nitro-14-oxo-8-oxa-1-azatetracyclo[7.7.1.02,7.013,17]heptadeca-2,4,6,9(17),10,12,15-heptaene-15-carboxylic acid Investigative 134346930 C16H5ClF2N2O6 394.67 C1=C2C3=C(C(=C1F)F)OC4=CC(=C(C=C4N3C=C(C2=O)C(=O)O)Cl)[N+](=O)[O-] IC50 = 125000 nM Poor binder T17048 DNA topoisomerase II alpha B69JUZ (2R,6R)-Methyl 6-((3R,3aR,5aS,6S,7S,9bR)-6-(3-methoxy-3-oxopropyl)-3a,6,9b-trimethyl-7-(prop-1-en-2-yl)-2,3,3a,4,5,5a,6,7,8,9b-decahydro-1H-cyclopenta[a]naphthalen-3-yl)-2-methyl-4-oxoheptanoate Investigative 11049543 C32H50O5 514.7 C[C@H](CC(=O)C[C@@H](C)C(=O)OC)[C@H]1CC[C@@]2([C@@]1(CC[C@@H]3C2=CC[C@H]([C@]3(C)CCC(=O)OC)C(=C)C)C)C IC50 = 67300 nM Poor binder T17048 DNA topoisomerase II alpha B6ZKB2 1-Methyl-3-[(E)-1-pyrazin-2-ylethylideneamino]thiourea Investigative 5375900 C8H11N5S 209.27 C/C(=N\\NC(=S)NC)/C1=NC=CN=C1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B7M2PE 7-{[2-(Dimethylamino)ethyl]amino}-5-imino-1,6-triphenyl-5,6-dihydropyrimido[4,5-d]pyrimidine-2,4(1H,3H)-dithione Investigative 45029397 C28H27N7S2 525.7 CN(C)CCN=C1N=C2C(=C(N1C3=CC=CC=C3)N)C(=S)N(C(=S)N2C4=CC=CC=C4)C5=CC=CC=C5 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B7XJ1D 1,3-Dihydroxy-9H-xanthen-9-one Investigative 5488193 C13H8O4 228.2 C1=CC=C2C(=C1)C(=O)C3=C(C=C(C=C3O2)O)O IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha B87LBN {4-Amino-6-[(4-fluorophenyl)amino]-1,3,5-triazin-2-yl}methyl morpholine-4-carbodithioate Investigative 1385849 C15H17FN6OS2 380.5 C1COCCN1C(=S)SCC2=NC(=NC(=N2)NC3=CC=C(C=C3)F)N IC50 = 139000 nM Poor binder T17048 DNA topoisomerase II alpha B8B0DH 6-(4-Methylpiperazin-1-yl)-2-[2-(4-prop-2-ynoxyphenyl)-3H-benzimidazol-5-yl]-1H-benzimidazole Investigative 58160590 C28H26N6O 462.5 CN1CCN(CC1)C2=CC3=C(C=C2)N=C(N3)C4=CC5=C(C=C4)N=C(N5)C6=CC=C(C=C6)OCC#C IC50 = 51600 nM Poor binder T17048 DNA topoisomerase II alpha B8HQ6Z (4S,5S)-5-[[Tert-butyl(dimethyl)silyl]oxymethyl]-4-[(3,4-dimethoxyphenyl)methyl]oxolan-2-one Investigative 137642577 C20H32O5Si 380.5 CC(C)(C)[Si](C)(C)OC[C@@H]1[C@H](CC(=O)O1)CC2=CC(=C(C=C2)OC)OC IC50 = 137000 nM Poor binder T17048 DNA topoisomerase II alpha BA4MH6 4-Benzylsulfanyl-6-[(2-chlorophenyl)methylsulfanyl]-1H-1,3,5-triazin-2-one Investigative 54578483 C17H14ClN3OS2 375.9 C1=CC=C(C=C1)CSC2=NC(=O)NC(=N2)SCC3=CC=CC=C3Cl IC50 = 94100 nM Poor binder T17048 DNA topoisomerase II alpha BA7UK3 2-Butyltriazolo[4,5-g]phthalazine-4,9-dione Investigative 21072879 C12H11N5O2 257.25 CCCCN1N=C2C(=N1)C(=O)C3=CN=NC=C3C2=O IC50 = 64800 nM Poor binder T17048 DNA topoisomerase II alpha BAC85V 2-Pyridinecarboxaldehyde thiosemicarbazone Investigative 5382559 C7H8N4S 180.23 C1=CC=NC(=C1)/C=N/NC(=S)N IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BAH0G8 1-[(2S,4S,5S)-5-[[Tert-butyl(dimethyl)silyl]oxymethyl]-4-[(3,4-dimethoxyphenyl)methyl]oxolan-2-yl]-5-methylpyrimidine-2,4-dione Investigative 137647664 C25H38N2O6Si 490.7 CC1=CN(C(=O)NC1=O)[C@@H]2C[C@@H]([C@H](O2)CO[Si](C)(C)C(C)(C)C)CC3=CC(=C(C=C3)OC)OC IC50 = 89200 nM Poor binder T17048 DNA topoisomerase II alpha BAR83W 6-Phenethylsulfanyl-7H-purin-2-amine Investigative 943044 C13H13N5S 271.34 C1=CC=C(C=C1)CCSC2=NC(=NC3=C2NC=N3)N IC50 = 85000 nM Poor binder T17048 DNA topoisomerase II alpha BB2C6A 2'-Phenyl-[2,4']bibenzooxazolyl Investigative 44338931 C20H12N2O2 312.3 C1=CC=C(C=C1)C2=NC3=C(C=CC=C3O2)C4=NC5=CC=CC=C5O4 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BB50SO 2-Ethyltriazolo[4,5-g]phthalazine-4,9-dione Investigative 21072878 C10H7N5O2 229.19 CCN1N=C2C(=N1)C(=O)C3=CN=NC=C3C2=O IC50 = 61500 nM Poor binder T17048 DNA topoisomerase II alpha BBI18H 3-Ethyltriazolo[4,5-g]phthalazine-4,9-dione Investigative 21072873 C10H7N5O2 229.19 CCN1C2=C(C(=O)C3=CN=NC=C3C2=O)N=N1 IC50 = 55600 nM Poor binder T17048 DNA topoisomerase II alpha BBP70N Chembl4226061 Investigative 132576592 C23H36O5S2Si 484.7 CC(C)(C)[Si](C)(C)OC[C@@H]1[C@H](CC(=O)O1)C2(SCCCS2)C3=CC(=C(C=C3)OC)OC IC50 = 55300 nM Poor binder T17048 DNA topoisomerase II alpha BBT15G 1-Benzyl-3-[(E)-2-pyridylmethyleneamino]thiourea Investigative 6892730 C14H14N4S 270.35 C1=CC=C(C=C1)CNC(=S)N/N=C/C2=CC=CC=N2 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BD1BP9 4-(2,4-Dihydroxy-6-pentylbenzoyl)oxy-2-hydroxybenzoic acid Investigative 76336671 C19H20O7 360.4 CCCCCC1=C(C(=CC(=C1)O)O)C(=O)OC2=CC(=C(C=C2)C(=O)O)O IC50 = 125000 nM Poor binder T17048 DNA topoisomerase II alpha BD4FZ8 3-(2-(Methylthio)thiazolo[5,4-b]quinolin-9-ylamino)phenol Investigative 44456349 C17H13N3OS2 339.4 CSC1=NC2=C(C3=CC=CC=C3N=C2S1)NC4=CC(=CC=C4)O IC50 = 64340 nM Poor binder T17048 DNA topoisomerase II alpha BDBH92 5-Amino-7-[3-(dimethylamino)propylimino]-1,3,6-triphenylpyrimido[4,5-d]pyrimidine-2,4-dithione Investigative 72206054 C29H29N7S2 539.7 CN(C)CCCN=C1N=C2C(=C(N1C3=CC=CC=C3)N)C(=S)N(C(=S)N2C4=CC=CC=C4)C5=CC=CC=C5 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BDF4B3 1H-[1,2,3]Triazolo[4,5-g]phthalazine-4,9-dione Investigative 21072874 C8H3N5O2 201.14 C1=C2C(=CN=N1)C(=O)C3=NNN=C3C2=O IC50 = 52800 nM Poor binder T17048 DNA topoisomerase II alpha BDMZ21 Methyl 2'-(2-hydroxyphenyl)-(2,4'-bibenzoxazole)-4-carboxylate Investigative 127748 C22H14N2O5 386.4 COC(=O)C1=C2C(=CC=C1)OC(=N2)C3=C4C(=CC=C3)OC(=N4)C5=CC=CC=C5O IC50 = 50000 nM Poor binder T17048 DNA topoisomerase II alpha BE0XH8 1-[(2R,4S,5S)-5-[[Tert-butyl(dimethyl)silyl]oxymethyl]-4-[(3,4-dimethoxyphenyl)methyl]oxolan-2-yl]-5-methylpyrimidine-2,4-dione Investigative 137636616 C25H38N2O6Si 490.7 CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO[Si](C)(C)C(C)(C)C)CC3=CC(=C(C=C3)OC)OC IC50 = 99100 nM Poor binder T17048 DNA topoisomerase II alpha BEHV02 1-[(2R,4S,5S)-4-[2-(3,4-Dimethoxyphenyl)-1,3-dithian-2-yl]-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione Investigative 101233649 C22H28N2O6S2 480.6 CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)C3(SCCCS3)C4=CC(=C(C=C4)OC)OC IC50 = 64500 nM Poor binder T17048 DNA topoisomerase II alpha BEOP64 5H-Quinolino[4,3-b]quinoxalin-6-one Investigative 110273100 C15H9N3O 247.25 C1=CC=C2C(=C1)C3=NC4=CC=CC=C4N=C3C(=O)N2 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BEVW64 4H-1-Benzopyran-3-carboxaldehyde, 2-(methylphenylamino)-4-oxo- Investigative 11425952 C17H13NO3 279.29 CN(C1=CC=CC=C1)C2=C(C(=O)C3=CC=CC=C3O2)C=O IC50 = 67860 nM Poor binder T17048 DNA topoisomerase II alpha BFXT89 4-Benzylsulfanyl-6-[(2-fluorophenyl)methylsulfanyl]-1H-1,3,5-triazin-2-one Investigative 54768947 C17H14FN3OS2 359.4 C1=CC=C(C=C1)CSC2=NC(=O)NC(=N2)SCC3=CC=CC=C3F IC50 = 72500 nM Poor binder T17048 DNA topoisomerase II alpha BFY04V 5-Amino-1,3,6-triphenyl-7-(2-pyridin-2-ylethylimino)pyrimido[4,5-d]pyrimidine-2,4-dithione Investigative 72206407 C31H25N7S2 559.7 C1=CC=C(C=C1)N2C(=C3C(=NC2=NCCC4=CC=CC=N4)N(C(=S)N(C3=S)C5=CC=CC=C5)C6=CC=CC=C6)N IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BG05HP 6-[2-(Dimethylamino)ethyl]-3-methylpyridazino[4,3-c]quinolin-5-one Investigative 134130551 C16H18N4O 282.34 CC1=CC2=C(C3=CC=CC=C3N(C2=O)CCN(C)C)N=N1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BH0J2N Methyl 3-[(3R,3aR,5aS,6S,7S,9bR)-3a,6,9b-trimethyl-3-[(2R)-1-[(2R,4R)-4-methyl-5-oxooxolan-2-yl]propan-2-yl]-7-prop-1-en-2-yl-1,2,3,4,5,5a,7,8-octahydrocyclopenta[a]naphthalen-6-yl]propanoate Investigative 637031 C31H48O4 484.7 C[C@@H]1C[C@H](OC1=O)C[C@@H](C)[C@H]2CC[C@@]3([C@@]2(CC[C@@H]4C3=CC[C@H]([C@]4(C)CCC(=O)OC)C(=C)C)C)C IC50 = 75700 nM Poor binder T17048 DNA topoisomerase II alpha BH8UX1 5-Amino-1,3,6-triphenyl-7-(2-pyridin-4-ylethylimino)pyrimido[4,5-d]pyrimidine-2,4-dithione Investigative 72206408 C31H25N7S2 559.7 C1=CC=C(C=C1)N2C(=C3C(=NC2=NCCC4=CC=NC=C4)N(C(=S)N(C3=S)C5=CC=CC=C5)C6=CC=CC=C6)N IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BHWS36 Schembl21810443 Investigative 137662271 C25H21N3O6S 491.5 COC1=CC(=CC(=C1O)OC)NC(=O)C2=C(N(C(=S)N(C2=O)C3=CC=CC=C3)C4=CC=CC=C4)O IC50 = 120000 nM Poor binder T17048 DNA topoisomerase II alpha BJ5Q1P 1-Pyrrolidinecarbothioic acid (2-pyridylmethylene) hydrazide Investigative 9577310 C11H14N4S 234.32 C1CCN(C1)C(=S)N/N=C/C2=CC=CC=N2 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BK3R7M 4-Benzylsulfanyl-6-[(4-fluorophenyl)methylsulfanyl]-1H-1,3,5-triazin-2-one Investigative 54768949 C17H14FN3OS2 359.4 C1=CC=C(C=C1)CSC2=NC(=O)NC(=N2)SCC3=CC=C(C=C3)F IC50 = 146600 nM Poor binder T17048 DNA topoisomerase II alpha BKQ0M1 Schembl21810417 Investigative 137636431 C23H17N3O4S 431.5 C1=CC=C(C=C1)N2C(=C(C(=O)N(C2=S)C3=CC=CC=C3)C(=O)NC4=CC=C(C=C4)O)O IC50 = 150000 nM Poor binder T17048 DNA topoisomerase II alpha BKT89X 2-Propan-2-yltriazolo[4,5-g]phthalazine-4,9-dione Investigative 44452369 C11H9N5O2 243.22 CC(C)N1N=C2C(=N1)C(=O)C3=CN=NC=C3C2=O IC50 = 54500 nM Poor binder T17048 DNA topoisomerase II alpha BL15MG 5-(2-Morpholin-4-ylethyl)quinolino[4,3-b]quinoxalin-6-one Investigative 134131206 C21H20N4O2 360.4 C1COCCN1CCN2C3=CC=CC=C3C4=NC5=CC=CC=C5N=C4C2=O IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BLGU51 N-Tert-butyl-2-(4-chlorophenyl)-6-phenylimidazo[1,2-a]pyridin-3-amine Investigative 122178382 C23H22ClN3 375.9 CC(C)(C)NC1=C(N=C2N1C=C(C=C2)C3=CC=CC=C3)C4=CC=C(C=C4)Cl IC50 = 55370 nM Poor binder T17048 DNA topoisomerase II alpha BLJ52C 3'-(3,4-Dihydroxybenzyl)-3'-deoxythymidine Investigative 101233647 C17H20N2O6 348.3 CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)CC3=CC(=C(C=C3)O)O IC50 = 176000 nM Poor binder T17048 DNA topoisomerase II alpha BM5O6U 3-[3-(Butylamino)-2-hydroxypropoxy]-1-hydroxyxanthen-9-one Investigative 73357046 C20H23NO5 357.4 CCCCNCC(COC1=CC(=C2C(=C1)OC3=CC=CC=C3C2=O)O)O IC50 = 100000 nM Poor binder T17048 DNA topoisomerase II alpha BMR18U 17-[2-(Dimethylamino)ethoxy]-11,12-diazapentacyclo[11.8.0.02,10.04,9.014,19]henicosa-1,4,6,8,10,12,14(19),15,17,20-decaen-3-one Investigative 137646471 C23H19N3O2 369.4 CN(C)CCOC1=CC2=C(C=C1)C3=NN=C4C5=CC=CC=C5C(=O)C4=C3C=C2 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BN7O9K 2-Pyridinecarbaldehyde 4-allyl(thiosemicarbazone) Investigative 7694997 C10H12N4S 220.3 C=CCNC(=S)N/N=C/C1=CC=CC=N1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BO6D0P 5-[3-(Dimethylamino)propyl]quinolino[4,3-b]quinoxalin-6-one Investigative 134130865 C20H20N4O 332.4 CN(C)CCCN1C2=CC=CC=C2C3=NC4=CC=CC=C4N=C3C1=O IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BOA4M6 1-Ethyl-3-[(E)-2-pyridylmethyleneamino]thiourea Investigative 7728685 C9H12N4S 208.29 CCNC(=S)N/N=C/C1=CC=CC=N1 IC50 = 94000 nM Poor binder T17048 DNA topoisomerase II alpha BP3BR2 5-[2-(Diethylamino)ethyl]quinolino[4,3-b]quinoxalin-6-one Investigative 134130052 C21H22N4O 346.4 CCN(CC)CCN1C2=CC=CC=C2C3=NC4=CC=CC=C4N=C3C1=O IC50 = 87580 nM Poor binder T17048 DNA topoisomerase II alpha BP81HN N2-(2-(Diethylamino)ethyl)-N9-phenylthiazolo[5,4-b]quinoline-2,9-diamine Investigative 10318315 C22H25N5S 391.5 CCN(CC)CCNC1=NC2=C(C3=CC=CC=C3N=C2S1)NC4=CC=CC=C4 IC50 = 168900 nM Poor binder T17048 DNA topoisomerase II alpha BPN8G4 Bis[2-[2-(6-chloro-8-oxo-14,15-diazatetracyclo[7.6.1.02,7.013,16]hexadeca-1(15),2(7),3,5,9(16),10,12-heptaen-14-yl)ethyl-methylamino]ethyl] butanedioate Investigative 25164921 C42H38Cl2N6O6 793.7 CN(CCN1C2=CC=CC3=C2C(=N1)C4=C(C3=O)C(=CC=C4)Cl)CCOC(=O)CCC(=O)OCCN(C)CCN5C6=CC=CC7=C6C(=N5)C8=C(C7=O)C(=CC=C8)Cl IC50 = 50000 nM Poor binder T17048 DNA topoisomerase II alpha BQA4L6 [2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-4-oxochromen-3-yl] 7-[(2-anilino-2-oxoethyl)amino]-7-oxoheptanoate Investigative 72375652 C30H28N2O10 576.5 C1=CC=C(C=C1)NC(=O)CNC(=O)CCCCCC(=O)OC2=C(OC3=CC(=CC(=C3C2=O)O)O)C4=CC(=C(C=C4)O)O IC50 = 149000 nM Poor binder T17048 DNA topoisomerase II alpha BQWE80 (2R)-2beta,4beta,8-Trimethyl-11-fluoro-1,2,4,4abeta-tetrahydrospiro[3,10-dioxa-9,11b-diaza-3H-cyclopenta[b]phenanthrene-5(6H),5'(2'H)-pyrimidine]-2',4',6'(1'H,3'H)-trione Investigative 45381704 C19H19FN4O5 402.4 C[C@@H]1CN2[C@H]([C@@H](O1)C)C3(CC4=CC5=C(C(=C42)F)ON=C5C)C(=O)NC(=O)NC3=O IC50 = 50000 nM Poor binder T17048 DNA topoisomerase II alpha BR06GD 2-Methyltriazolo[4,5-g]phthalazine-4,9-dione Investigative 11629881 C9H5N5O2 215.17 CN1N=C2C(=N1)C(=O)C3=CN=NC=C3C2=O IC50 = 55600 nM Poor binder T17048 DNA topoisomerase II alpha BS6E8V 4-Methyl-1-(1-(2-pyridyl)ethylidene)-3-thiosemicarbazide Investigative 5996579 C9H12N4S 208.29 C/C(=N\\NC(=S)NC)/C1=CC=CC=N1 IC50 = 92000 nM Poor binder T17048 DNA topoisomerase II alpha BSL65F (3E)-3-[(3,4,5-Trihydroxyphenyl)methylidene]-1-benzofuran-2-one Investigative 44401922 C15H10O5 270.24 C1=CC=C2C(=C1)/C(=C\\C3=CC(=C(C(=C3)O)O)O)/C(=O)O2 IC50 = 63000 nM Poor binder T17048 DNA topoisomerase II alpha BT08NK 4-[(4-Benzylsulfanyl-6-oxo-1H-1,3,5-triazin-2-yl)sulfanylmethyl]benzonitrile Investigative 54769407 C18H14N4OS2 366.5 C1=CC=C(C=C1)CSC2=NC(=O)NC(=N2)SCC3=CC=C(C=C3)C#N IC50 = 153400 nM Poor binder T17048 DNA topoisomerase II alpha BU19OR Indeno[1,2-c]cinnolin-11-one Investigative 11776102 C15H8N2O 232.24 C1=CC=C2C(=C1)C3=C(C2=O)C4=CC=CC=C4N=N3 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BU5NJ7 N-[(5S,5As,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5a,6,8a,9-tetrahydro-5H-[2]benzofuro[5,6-f][1,3]benzodioxol-5-yl]-4-[3-(trifluoromethyl)diazirin-3-yl]benzamide Investigative 46229825 C30H24F3N3O8 611.5 COC1=CC(=CC(=C1O)OC)[C@H]2[C@@H]3[C@H](COC3=O)[C@@H](C4=CC5=C(C=C24)OCO5)NC(=O)C6=CC=C(C=C6)C7(N=N7)C(F)(F)F IC50 = 114000 nM Poor binder T17048 DNA topoisomerase II alpha BUN0D9 N'-Benzyl-N'-methyl-N-quinolino[4,3-b]quinoxalin-6-ylpentane-1,5-diamine Investigative 134131490 C28H29N5 435.6 CN(CCCCCNC1=NC2=CC=CC=C2C3=NC4=CC=CC=C4N=C31)CC5=CC=CC=C5 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BUZ69I 4-Ethyl-1-(1-(2-pyridyl)ethylidene)-3-thiosemicarbazide Investigative 5920829 C10H14N4S 222.31 CCNC(=S)N/N=C(\\C)/C1=CC=CC=N1 IC50 = 79000 nM Poor binder T17048 DNA topoisomerase II alpha BVZ7G6 6-[3-(Dimethylamino)propyl]-3-methylpyridazino[4,3-c]quinolin-5-one Investigative 134130152 C17H20N4O 296.37 CC1=CC2=C(C3=CC=CC=C3N(C2=O)CCCN(C)C)N=N1 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BX3B7N 5-Imino-1,6-triphenyl-7-[(pyridin-2-ylmethyl)amino]-5,6-dihydropyrimido[4,5-d]pyrimidine-2,4(1H,3H)-dithione Investigative 45029396 C30H23N7S2 545.7 C1=CC=C(C=C1)N2C(=C3C(=NC2=NCC4=CC=CC=N4)N(C(=S)N(C3=S)C5=CC=CC=C5)C6=CC=CC=C6)N IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BX4RU1 N,N-Diethyl-2-quinolino[4,3-b]quinoxalin-6-yloxyethanamine Investigative 134129981 C21H22N4O 346.4 CCN(CC)CCOC1=NC2=CC=CC=C2C3=NC4=CC=CC=C4N=C31 IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BXE8Y1 (5S)-5-[[Tert-butyl(dimethyl)silyl]oxymethyl]-4-[2-(3,4-dimethoxyphenyl)-1,3-dithian-2-yl]oxolan-2-one Investigative 137656647 C23H36O5S2Si 484.7 CC(C)(C)[Si](C)(C)OC[C@@H]1C(CC(=O)O1)C2(SCCCS2)C3=CC(=C(C=C3)OC)OC IC50 = 55700 nM Poor binder T17048 DNA topoisomerase II alpha BXN4R6 Bengacarboline Investigative 10741986 C29H27N5 445.6 C1CNC(C2=C1C3=CC=CC=C3N2)(C4=CNC5=CC=CC=C54)C6=C(C7=CC=CC=C7N6)CCN IC50 ~ 100000 nM Poor binder T17048 DNA topoisomerase II alpha BZ45LU 17-[3-(Dimethylamino)propoxy]-11,12-diazapentacyclo[11.8.0.02,10.04,9.014,19]henicosa-1,4,6,8,10,12,14(19),15,17,20-decaen-3-one Investigative 137653544 C24H21N3O2 383.4 CN(C)CCCOC1=CC2=C(C=C1)C3=NN=C4C5=CC=CC=C5C(=O)C4=C3C=C2 IC50 = 52890 nM Poor binder